.. DO NOT EDIT.
.. THIS FILE WAS AUTOMATICALLY GENERATED BY SPHINX-GALLERY.
.. TO MAKE CHANGES, EDIT THE SOURCE PYTHON FILE:
.. "auto_examples/plot_data.py"
.. LINE NUMBERS ARE GIVEN BELOW.

.. only:: html

    .. note::
        :class: sphx-glr-download-link-note

        :ref:`Go to the end <sphx_glr_download_auto_examples_plot_data.py>`
        to download the full example code.

.. rst-class:: sphx-glr-example-title

.. _sphx_glr_auto_examples_plot_data.py:


Tutorial 01: Simple plot of cortical surface data
=================================================
Example script to plot simple data to cortical surface

.. GENERATED FROM PYTHON SOURCE LINES 6-30







.. code-block:: Python

    from surface_plot import plot_surface
    import numpy as np

    outdir = 'data/simple_plot/test_figures'
    clobber = False

    # Load data
    data_left = np.loadtxt('https://www.dropbox.com/s/lezvpw14iw13d9r/data_left.mean?dl=1', skiprows=1)
    data_right = np.loadtxt('https://www.dropbox.com/s/lm3e6ykjm7rhdi5/data_right.mean?dl=1', skiprows=1)

    data = {'left': data_left,
            'right': data_right}

    # Plot mean data - automatic limits
    output = f'{outdir}/simple_autolim.pdf'
    plot_surface.plot_surface(data, output, clobber=clobber)

    # Plot mean data - predetermined limits
    output = f'{outdir}/simple_withlim.pdf'
    plot_surface.plot_surface(data, output, vlim=[0, 2.5], cbar_loc='bottom', clobber=clobber)

    # Plot mean data - predetermined limits with title
    output = f'{outdir}/simple_withlim_title.pdf'
    plot_surface.plot_surface(data, output, vlim=[0.5, 3], cbar_loc='bottom', title='PiB uptake', cbar_title='Mean SUVR', clobber=clobber)


.. rst-class:: sphx-glr-timing

   **Total running time of the script:** (0 minutes 33.157 seconds)


.. _sphx_glr_download_auto_examples_plot_data.py:

.. only:: html

  .. container:: sphx-glr-footer sphx-glr-footer-example

    .. container:: sphx-glr-download sphx-glr-download-jupyter

      :download:`Download Jupyter notebook: plot_data.ipynb <plot_data.ipynb>`

    .. container:: sphx-glr-download sphx-glr-download-python

      :download:`Download Python source code: plot_data.py <plot_data.py>`

    .. container:: sphx-glr-download sphx-glr-download-zip

      :download:`Download zipped: plot_data.zip <plot_data.zip>`


.. only:: html

 .. rst-class:: sphx-glr-signature

    `Gallery generated by Sphinx-Gallery <https://sphinx-gallery.github.io>`_